Ph.D., Institue of Statistics, National Tsing Hua University, Taiwan, 2003
M.S., Institute of Applied Mathematics,
National Cheng Kung University, Taiwan, 1997
B.S., Department of Statistics, Feng Chia University, Taiwan, 1993
Experiences:
Distinguished Professor, Graduate Institute of Statistics & Department of Applied Mathematics,
National Chung Hsing University, Taiwan, 2/2023 - present
Professor, Graduate Institute of Statistics & Department of Applied Mathematics,
National Chung Hsing University, Taiwan, 08/2018 - present
Dean, School of Informatics and Data Science,
National Chung Hsing University, Taiwan, 08/2021 - 07/2023
Director, Graduate Institute of Data Science & Information Computing,
National Chung Hsing University, Taiwan, 08/2021 - 07/2023
Director, Department of Applied Mathematics,
National Chung Hsing University, Taiwan, 08/2021 - 07/2023
Director, Graduate Institute of Statistics,
National Chung Hsing University, Taiwan, 08/2021 - 07/2023
Director, Preparatory Office of School of Informatics and Data Science,
National Chung Hsing University, Taiwan, 06/2021 - 07/2021
Director, Big Data Ph.D. Program,
National Chung Hsing University, Taiwan, 02/2020 - 07/2021
Director, Center of Science Education of College of Science,
National Chung Hsing University, Taiwan, 02/2020 - 07/2021
Division Director, Big Data Center,
National Chung Hsing University, Taiwan, 01/2020 - 07/2021
Visiting Professor, Department of Renewable Resources, University of Alberta, Canada, 06/2016 - 01/2017
Associate Professor, Graduate Institute of Statistics & Department of Applied Mathematics,
National Chung Hsing University, Taiwan, 08/2010 - 07/2018
Assistant Professor, Department of Applied Mathematics,
National Chung Hsing University, Taiwan, 02/2004 - 07/2010
Post Doctoral fellow,
Institute of Statistics, National Tsing Hua University, Taiwan, 08/2003 - 01/2004
Research Interest:
He is a statistician but is interested in ecological and conservation-directed applications/modeling. The former includes the estimation of alpha/beta/gamma diversity indices, species richness prediction, modeling of species' distributional patterns, and so forth. The latter interesting him springs from a practical question: How many newly found (rare) species are there when conducting an as-yet-unsurveyed sample? Now, some of his projects focus on topics which can be directly or indirectly related to conservation-directed issues.
Publications: corresponding authour(s) indicated by ✉
Chen, Y.✉ and Shen, T.-J.✉ (2024).
Distributional ecology: Opening new research windows by addressing aggregation-related puzzles.
Diversity and Distributions, Early View (e13818), 1-18.
[ FULL-TEXT]
Chen, Y., Wang, R.-H., and Shen, T.-J.✉ (2023).
Biodiversity survey and estimation for line-transect sampling.
Frontiers in Plant Science, 14:1159090, 1-11.
[ FULL-TEXT]
Liao, Z., Zhou, J., Shen, T.-J.✉, and Chen, Y.✉ (2023).
Inferring single- and multi-species distributional aggregation using quadrat sampling.
Ecological Indicators, 156: Article 111085, 1-7.
[ FULL-TEXT]
Chen, Y., Wu, Y., Chang, C.-H., and Shen, T.-J.✉ (2023). How close is an undiscovered species to you after conducting biodiversity sampling?
Ecological Indicators, 154: Article 110482, 1-5.
[ FULL-TEXT]
Wu H.W., Lu D.J., Lin C.L., Cheng H.C., Juan C.H., Shen T.-J., Lin H.C., Chen S.F.✉ (2022). Population and conservation status of Pteropus dasymallus in Taiwan.
Zoological Studies, 61:34 doi:10.6620/ZS.2022.61-34.
[ FULL-TEXT]
Liu, Z., Liu, X. and Shen, T.-J.✉ (2022). Applicability of common algorithms in species-area relationship model fitting.
Diversity, 14, 1-12.
[ FULL-TEXT]
Wu, Y., Chen, Y., Li, F.-Q., Shen, T.-J.✉ and Nielsen, S. E. (2022). Abundance- and incidence-based estimation of total number of rare species in under-sampled sites.
Applied Vegetation Science, 25, 1-11.
[ FULL-TEXT]
Chen, Y., Wu, Y., Zhou, J., Zhang, W. , Lin, H.-D., Liu, X., Pan, K., Shen, T.-J.✉ and Pan, Z. (2021). Effectively inferring overall spatial distribution pattern of species in a map when exact coordinate information is missing.
Methods in Ecology and Evolution, 12, 971-984.
[ FULL-TEXT]
Chen, Y., Shen, T.-J.✉ and Condit, R. (2021). Disentangling multi-species aggregate versus overlapping distributions.
Journal of Vegetation Science, 32:e12973, 1-12.
[ FULL-TEXT]
Chen, Y. and Shen, T.-J.✉ (2020). Unifying conspecific-encounter index v and Moran’s I index. Ecography, 43, 1902-1904. [ FULL-TEXT]
Chen, Y., Wu, Y., Chen, W., Zhao, T., Zhang, W. and Shen, T.-J.✉ (2020). Application of a negative multinomial model gives insight into rarity-area relationships. Forests, 11 (5), 571. [ FULL-TEXT]
Wu, Y., Chen, Y. and Shen, T.-J.✉ (2020). A likelihood framework for modeling pairwise beta diversity patterns based on the tradeoff between colonization and extinction. Frontiers in Ecology and Evolution (Specialty section: Biogeography and Macroecology), 8: 64. [ FULL-TEXT]
Wu, Y., Chen, Y., Chang, S.-C., Chen, Y.-F. and Shen, T.-J.✉ (2020). Extinction debt in local habitats: quantifying the roles of random drift, immigration, and emigration. Royal Society Open Science, 7: 191039. [ FULL-TEXT]
Chen, Y., Shen, T.-J.✉, Chung, H. V., Shi, S., Jiang, J., Condit, R. and Hubbell, S. P. (2019). Inferring multi-species distributional aggregation level from limited line transect-derived biodiversity data.
Methods in Ecology and Evolution, 10, 1015-1023.
[ FULL-TEXT][SUPPORTING INFORMATION]
Wu, Y., Chen, Y.✉ and Shen, T.-J.✉ (2019). Comparing Allee effect-based and dispersal-based neutral models for species abundance distribution patterns.
Ecological Informatics, 52, 69-73.
[ Link to This Journal]
Shen, T.-J. and Chen, Y.✉ (2019).
A Bayesian-weighted approach to predicting the number of newly discovered rare species.
Conservation Biology, 33, 444-455.
[ FULL-TEXT]
[ R package: RSE ]
[ RSE's vignette][ RSE's manual]
Chen, Y., Shen, T.-J.✉, Condit, R. and Hubbell, S. P. (2018).
Community-level species’ correlated distribution can be scale-independent and related to the evenness of abundance.
Ecology, 99, 2787-2800.
[ FULL-TEXT][SUPPORTING INFORMATION]
Chen, Y., Wu, Y. and Shen, T.-J.✉ (2018).
Evaluation of the estimate bias magnitude of the Rao's quadratic diversity index.
PeerJ, 6: e5211
[ FULL-TEXT]
Shen, T.-J., Chen, Y.✉ and Chen, Y.-F. (2017).
Estimating species pools for a single ecological assemblage.
BMC Ecology, 17: 45
[ FULL-TEXT]
[ BMC Ecology's Blog]
Chen, Y. and Shen, T.-J.✉ (2017).
Rarefaction and extrapolation of species richness using an area-based Fisher's logseries.
Ecology and Evolution, 7, 10066-10078.
[ FULL-TEXT]
Chen, S.-F.✉, Shen, T.-J., Lee, H., Wu, H., Zeng, W., Lu, D., and Lin, H. (2017).
Preference of an insular flying fox for seed figs enhances seed dispersal of a dioecious species.
Biotropica, 49, 511-520.
[ Link to This Journal]
Chen, Y.✉ and Shen, T.-J.✉ (2017).
A general framework for predicting delayed responses of ecological communities to habitat loss.
Scientific Reports, 7: 998
[ FULL-TEXT]
Chen, S.-F.✉, Huang, S.-S., Lu. D.-J., and Shen, T.-J. (2016).
Postnatal growth and age estimation in Scotophilus kuhlii.
Zoo Biology, 35, 35-41.
[ FULL-TEXT]
Chuang, C.-J., Shen, T.-J. and Hwang, W.-H.✉ (2015).
Estimating the number of shared species by a jackknife
procedure.
Environmental and Ecological Statistics, 22, 759-778.
[ Link to This Journal]
Hwang, W.-H., Lin, C.-W. and Shen, T.-J.✉ (2015).
Good--Turing frequency estimation in a finite population.
Biometrical Journal, 57, 321-339.
[ FULL-TEXT]
Shen, T.-J., Kuo, C.-C., Wang, C.-F. and Huang, K.-W.✉ (2014).
Delimitation of continuous morphological character with unknown prior membership: application of finite mixture model to classify scapular setae of Abacarus panticis Keifer.
Experimental and Applied Acarology, 63, 361-375.
[ Link to This Journal]
Shen, T.-J., Hwang, W.-H.✉ and Chuang, C.-J. (2013).
Practical method to species richness estimation in plant community.
Journal of the Chinese Statistical Association, 51, 119-140.
[ Link to This Journal]
Hwang, W.-H.✉ and Shen, T.-J.✉ (2010).
Small-sample estimation of species richness applied to forest communities.
Biometrics, 66, 1052-1060.
[ FULL-TEXT]
Shen, T.-J.✉ and He, F. (2008).
An incidence-based richness estimator for quadrats sampled without replacement.
Ecology, 89, 2052-2060.
[ FULL-TEXT]
Chao, A.✉, Shen, T.-J. and Hwang, W.-H. (2006).
Application of Laplace's boundary-mode approximations to estimate species and shared species richness.
Australian and New Zealand Journal of Statistics, 48, 117-128.
[ Link to This Journal]
Chao, A.✉, Chazdon, R. L., Colwell, R. K. and Shen, T.-J. (2006).
Abundance-based similarity indices and their estimation when there are unseen species in samples.
Biometrics, 62, 361-371.
[ FULL-TEXT]
Chao, A., Chazdon, R. L.✉, Colwell, R. K. and Shen, T.-J. (2005).
A new statistical approach for assessing similarity of species composition with incidence and abundance data.
Ecology Letters, 8, 148-159.
[ Link to This Journal]
Chao, A.✉ and Shen, T.-J. (2004).
Nonparametric prediction in species sampling.
Journal of Agricultural, Biological and Environmental Statistics, 9, 253-269.
[ Link to This Journal]
Chao, A.✉ and Shen, T.-J. (2003).
Nonparametric estimation of Shannon's index of diversity when
there are unseen species in sample.
Environmental and Ecological Statistics, 10, 429-443.
[ Link to This Journal]
Shen, T.-J.,
Chao, A.✉
and Lin, J.-F. (2003).
Predicting the number of new species in further taxonomic sampling.
Ecology, 84, 798-804.
[ FULL-TEXT]
Other Publications:
Shen, T.-J. (2003). Prediction of Biodiversity. Ph.D. dissertation. (under supervision of
Dr. Anne Chao )
